AllPairsMFE: single sequence RNAbow with MFE pairs highlighted

Input mode
Sequence (plain, FASTA, GenBank, etc.) [?]


If you copy and paste the L. collosoma Spliced Leader sequence


into the sequence box, you will get the AllPairsMFE RNAbow diagram below.
RNAbows spliced leader AllPairsMFE RNAbow A A C U A A A A C A A U U U U U G A A G A A C A G U U U C U G U A C U U C A U U G G U A U G U A G A G A C U U C G = -11.0145 kcal/mol G = -9.9 kcal/mol

Understanding the Output